A console-based application for reading, sanitizing, modifying and adding annotations to genomic data. Writes an NCBI .tbl file.
Command-line tool for cleaning up transcriptome assemblies, adding functional annotations and preparing them for submission to the NCBI
Command-line tool for collecting functional annotations from IPRScan and SwissProt Blast results, filtering them and writing them to a format readable by GAG or transvestigator.
Command line tool for designing primers with the capability to target sites based on intron location, exclude sites based on previously-designed primer locations, and verify primers' suitability using Blast.
Command line tools to split a scaffolded fasta into a contigged fasta and .gap file, or reverse the process.